* ''Boophis albilabris'' (Boulenger, 1888)
* ''Boophis albipunctatus'' Glaw & Thiesmeier, 1993
* ''Boophis andohahela'' Andreone, Nincheri & Piazza, 1995
* ''Boophis andreonei'' Glaw & Vences, 1994
* ''Boophis androngoloaka'' (Ahl, 1928)
* ''Boophis anjanaharibeensis'' Andreone, 1996
* ''Boophis ankaratra'' Andreone, 1993
* ''Boophis ankarafensis'' Penny, Andreone, Crottini, Holderied, Rakotozafy, Schwitzer & Rosa, 2014
* ''Boophis arcanus'' Glaw, Köhler, de la Riva, Vieites & Vences, 2010
* ''Boophis axelmeyeri'' Vences, Andreone & Veities, 2005
* ''Boophis baetkei'' Köhler, Glaw & Vences, 2008
* ''Boophis blommersae'' Glaw & Vences, 1994
* ''Boophis boehmei'' Glaw & Vences, 1992
* ''Boophis boppa'' Hutter & Lambert, 2015
* ''Boophis bottae'' Vences & Glaw, 2002
* ''Boophis brachychir'' Boettger, 1882
* ''Boophis burgeri'' Glaw & Vences, 1994
* ''Boophis calcaratus'' Vallan, Vences & Glaw, 2010
* ''Boophis doulioti'' Angel, 1934
* ''Boophis elenae'' Andreone, 1993
* ''Boophis englaenderi'' Glaw & Vences, 1994
* ''Boophis entingae'' Glaw, Köhler, de la Riva, Vieites & Vences, 2010
* ''Boophis erythrodactylus'' (Guibé, 1953)
* ''Boophis feonnyala'' Glaw, Vences, Andreone & Vallan, 2001
* ''Boophis fayi'' Köhler, Glaw, Rosa, Gehring, Pabijan, Andreone & Vences, 2011
* ''Boophis goudotii'' Tschudi, 1838
* ''Boophis guibei'' (McCarthy, 1978)
* ''Boophis haematopus'' Glaw, Vences, Andreone & Vallan, 2001
* ''Boophis haingana'' Glaw, Köhler, de la Riva, Vieites & Vences, 2010
* ''Boophis idae'' (Steindachner, 1867)
* ''Boophis jaegeri'' Glaw & Vences, 1992 – Green Skeleton Frog
* ''Boophis laurenti'' Guibé, 1947
* ''Boophis liami'' Vallan, Vences & Glaw, 2003
* ''Boophis lichenoides'' Vallan, Glaw, Andreone & Cadle, 1998
* ''Boophis lilianae'' Köhler, Glaw & Vences, 2008
* ''Boophis luciae'' Glaw, Köhler, de la Riva, Vieites & Vences, 2010
* ''Boophis luteus'' (Boulenger, 1882)
* ''Boophis madagascariensis'' (Peters, 1874)
* ''Boophis majori'' (Boulenger, 1896)
* ''Boophis mandraka'' Blommers-Schlösser, 1979
* ''Boophis marojezensis'' Glaw & Vences, 1994
* ''Boophis miadana'' Glaw, Köhler, de la Riva, Vieites & Vences, 2010
* ''Boophis microtympanum'' (Boettger, 1881)
* ''Boophis miniatus'' (Mocquard, 1902)
* ''Boophis narinsi'' Vences, Gehara, Köhler & Glaw, 2012
* ''Boophis obscurus'' (Boettger, 1913)
* ''Boophis occidentalis'' Glaw & Vences, 1994
* ''Boophis opisthodon'' (Boulenger, 1888)
* ''Boophis pauliani'' (Guibé, 1953)
* ''Boophis periegetes'' Cadle, 1995
* ''Boophis picturatus'' Glaw, Vences, Andreone & Vallan, 2001
* ''Boophis piperatus'' Glaw, Köhler, de la Riva, Vieites & Vences, 2010
* ''Boophis popi'' Köhler, Glaw, Rosa, Gehring, Pabijan, Andreone & Vences, 2011
* ''Boophis praedictus'' Glaw, Köhler, de la Riva, Vieites & Vences, 2010
* ''Boophis pyrrhus'' Glaw, Vences, Andreone & Vallan, 2001
* ''Boophis quasiboehmei'' vences, Köhler, Crottini & Glaw, 2010
* ''Boophis rappiodes'' (Ahl, 1928)
* ''Boophis reticulatus'' Blommers-Schlösser, 1979
* ''Boophis rhodoscelis'' (Boulenger, 1882)
* ''Boophis roseipalmatus'' Glaw, Köhler, de la Riva, Vieites & Vences, 2010
* ''Boophis rufioculis'' Glaw & Vences, 1997
* ''Boophis sambirano'' Vences & Glaw, 2005
* ''Boophis sandrae'' Glaw, Köhler, de la Riva, Vieites & Vences, 2010
* ''Boophis schuboeae'' Glaw & Vences, 2002
* ''Boophis septentrionalis'' Glaw & Vences, 1994
* ''Boophis sibilans'' Glaw & Thiesmeier, 1993
* ''Boophis solomaso'' Vallan, Vences & Glaw, 2003
* ''Boophis spinophis'' Glaw, Köhler, de la Riva, Vieites & Vences, 2010
* ''Boophis tampoka'' Köhler, Glaw & Vences, 2007
* ''Boophis tasymena'' Vences & Glaw, 2002
* ''Boophis tephraeomystax'' (Duméril, 1853)
* ''Boophis tsilomaro'' Vences, Andreone, Glos & Glaw, 2010
* ''Boophis ulftunni'' Wollenberg, Andreone, Glaw & Vences, 2008
* ''Boophis viridis'' Blommers-Schlösser, 1979
* ''Boophis vittatus'' Glaw, Vences, Andreone & Vallan, 2001
* ''Boophis williamsi'' (Guibé, 1974)
* ''Boophis xerophilus'' Glaw & Vences, 1997